WebNov 8, 2024 · exomePeak2 call RNA modification peaks and calculate peak statistics from BAM files of a MeRIP-seq experiment. The transcript annotation (from either the TxDb … WebApr 24, 2024 · 前面我们分享了 跟着Nature Medicine学MeDIP-seq数据分析,数据和代码都是公开,这个2G的压缩包文件,足以学习3个月,写60篇教程。. 这里面的MeDIP-seq指的是DNA,那么MeRIP-seq其实就是RNA水平的又叫做m6a测序,恰好看到了咱们的表观微信交流群我们的生信技能树优秀转录组讲师在分享全套MeRIP-seq文章图表 ...
孟佳课题组 m6A数据Peak识别软件exomePeak2使用指北 - 简书
WebFeb 7, 2024 · 2024-02-07. exomePeak2 provides peak detection and differential methylation for Methylated RNA Immunoprecipitation Sequencing ( MeRIP-Seq) data. MeRIP-Seq is a commonly applied … WebNov 8, 2024 · exomePeak2 provides bias awared quantification and peak detection on Methylated RNA immunoprecipitation sequencing data (MeRIP-Seq). MeRIP-Seq is a commonly applied sequencing technology to measure the transcriptome-wide location and abundance of RNA modification sites under a given cellular condition. However, the … helluva boss ep 3 season 2
易基因 独家分享:m6A peak鉴定经典软件exomPeak原理解析
WebNov 19, 2024 · # 画分布图: library(m6Amonster) peak <- read.table("dmso.peak.bed",sep = "\t", stringsAsFactors = F) plotMetaGene(peak,gtf = "mm10.gtf") WebDec 18, 2024 · 第一个参数为peak的bed文件,第二个参数为参考基因组的名称。 输出结果如下所示 注释的内容包含两个部分,第一部分是距离peak区间最近的转录起始位点TSS,第二部分是对peak在基因组区域的分布,比如TSS,TTS,3’UTR,5’UTR等区域。 WebMay 15, 2024 · Hi Gang, The first warning message indicates that it ignored un expected information in the phase column of the GTF file, but it does not cause difference in the output since exomePeak2 do not use the metadata information. helluva boss ep 7